Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Gm12943-201ENSMUST00000119616 210 ntBASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Gm11354-201ENSMUST00000121974 422 ntBASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Gm30671-201ENSMUST00000214898 318 ntBASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Gm5468-202ENSMUST00000227851 682 ntBASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Gm10263-201ENSMUST00000085163 300 ntBASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc17Q8CE13 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Gm11560-201ENSMUST00000117567 948 ntBASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Gm7082-201ENSMUST00000209880 969 ntBASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccdc17Q8CE13 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms