Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Snord23-201ENSMUST00000116828 109 ntBASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Gm29410-201ENSMUST00000188383 694 ntBASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Alx1Q8C8B0 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Gm9673-201ENSMUST00000119287 781 ntBASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Gm11952-201ENSMUST00000121172 821 ntBASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Gm22442-201ENSMUST00000157256 144 ntBASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Gm16165-201ENSMUST00000160140 795 ntBASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.13□□□□□ -0.31
Alx1Q8C8B0 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Gm23153-201ENSMUST00000175323 313 ntBASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Gm28032-201ENSMUST00000184104 96 ntBASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.13□□□□□ -0.31
Alx1Q8C8B0 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Gm9102-201ENSMUST00000219250 465 ntBASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 AC129975.1-201ENSMUST00000224816 592 ntBASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.13□□□□□ -0.31
Alx1Q8C8B0 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Gm42588-201ENSMUST00000200538 1297 ntBASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.12□□□□□ -0.31
Alx1Q8C8B0 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms