Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Aph1bQ8C7N7 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Aph1bQ8C7N7 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Aph1bQ8C7N7 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Aph1bQ8C7N7 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Aph1bQ8C7N7 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.14□□□□□ -0.63
Aph1bQ8C7N7 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Aph1bQ8C7N7 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Aph1bQ8C7N7 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.14□□□□□ -0.63
Aph1bQ8C7N7 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.14□□□□□ -0.63
Aph1bQ8C7N7 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Aph1bQ8C7N7 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm14058-201ENSMUST00000116082 735 ntBASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm13809-201ENSMUST00000117921 597 ntBASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm11450-201ENSMUST00000121144 333 ntBASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm14017-201ENSMUST00000121934 386 ntBASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm29067-201ENSMUST00000190821 470 ntBASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm43058-201ENSMUST00000197645 625 ntBASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm44506-201ENSMUST00000206278 965 ntBASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.13□□□□□ -0.63
Aph1bQ8C7N7 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Gm11244-201ENSMUST00000121243 237 ntBASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Gm8574-201ENSMUST00000203207 924 ntBASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Gm18212-201ENSMUST00000211678 889 ntBASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Olfr584-201ENSMUST00000098210 964 ntBASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms