Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim9Q8C7M3 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Gm8302-201ENSMUST00000119217 852 ntBASIC12.43□□□□□ -0.42
Trim9Q8C7M3 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.43□□□□□ -0.42
Trim9Q8C7M3 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Gm37905-201ENSMUST00000195310 341 ntBASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Gm45398-201ENSMUST00000210561 165 ntBASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim9Q8C7M3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.42□□□□□ -0.42
Trim9Q8C7M3 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.42□□□□□ -0.42
Trim9Q8C7M3 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim9Q8C7M3 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms