Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Gm4917-201ENSMUST00000121452 650 ntBASIC13.17□□□□□ -0.3
Usp44Q8C2S0 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Gm19459-201ENSMUST00000176240 835 ntBASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Mir7076-201ENSMUST00000183519 74 ntBASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.17□□□□□ -0.3
Usp44Q8C2S0 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 AC124732.3-201ENSMUST00000221835 1765 ntBASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp44Q8C2S0 Gm42815-201ENSMUST00000198787 1470 ntBASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Gm28388-201ENSMUST00000186262 437 ntBASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Gm43667-201ENSMUST00000198616 1095 ntBASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Gm45550-201ENSMUST00000209380 946 ntBASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Gm9111-201ENSMUST00000219394 709 ntBASIC13.16□□□□□ -0.3
Usp44Q8C2S0 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Usp44Q8C2S0 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Gm15131-201ENSMUST00000119124 595 ntBASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Gm14460-201ENSMUST00000121511 639 ntBASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Gm25343-201ENSMUST00000157460 107 ntBASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.15□□□□□ -0.3
Usp44Q8C2S0 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms