Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gm14441-201ENSMUST00000121960 540 ntBASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gm25668-201ENSMUST00000157700 129 ntBASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gm37259-201ENSMUST00000193903 849 ntBASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gm38314-201ENSMUST00000195709 625 ntBASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 AC154222.2-201ENSMUST00000225848 607 ntBASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gm10312-201ENSMUST00000078515 489 ntBASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tsen54Q8C2A2 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tsen54Q8C2A2 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tsen54Q8C2A2 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tsen54Q8C2A2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tsen54Q8C2A2 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Tsen54Q8C2A2 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tsen54Q8C2A2 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tsen54Q8C2A2 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.46□□□□□ -0.89
Tsen54Q8C2A2 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Tsen54Q8C2A2 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tsen54Q8C2A2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tsen54Q8C2A2 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tsen54Q8C2A2 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tsen54Q8C2A2 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tsen54Q8C2A2 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.46□□□□□ -0.89
Tsen54Q8C2A2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Gm14832-201ENSMUST00000121289 322 ntBASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Tsen54Q8C2A2 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tsen54Q8C2A2 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tsen54Q8C2A2 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tsen54Q8C2A2 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms