Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Gm23272-201ENSMUST00000104053 129 ntBASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Gm11949-201ENSMUST00000117640 372 ntBASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Gm24992-201ENSMUST00000157412 130 ntBASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Gm19246-201ENSMUST00000173599 255 ntBASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Mir6546-201ENSMUST00000184460 62 ntBASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Gm37466-201ENSMUST00000195692 652 ntBASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Gm44315-201ENSMUST00000203041 219 ntBASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trub1Q8C0D0 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Gm14395-201ENSMUST00000120494 563 ntBASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Gm15432-201ENSMUST00000121106 195 ntBASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Gm8737-201ENSMUST00000122208 642 ntBASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Gm21092-201ENSMUST00000178995 955 ntBASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Mir7070-201ENSMUST00000183657 86 ntBASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Gm17831-201ENSMUST00000205579 900 ntBASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 BC043934-202ENSMUST00000185694 2356 ntBASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trub1Q8C0D0 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms