Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Gm13600-201ENSMUST00000117949 744 ntBASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Gm13022-201ENSMUST00000121181 285 ntBASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Gm24248-201ENSMUST00000157321 322 ntBASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Gm17192-201ENSMUST00000169031 511 ntBASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Gm4604-201ENSMUST00000025040 390 ntBASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sh3rf2Q8BZT2 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sh3rf2Q8BZT2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Sh3rf2Q8BZT2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sh3rf2Q8BZT2 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sh3rf2Q8BZT2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sh3rf2Q8BZT2 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sh3rf2Q8BZT2 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Sh3rf2Q8BZT2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Sh3rf2Q8BZT2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Sh3rf2Q8BZT2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sh3rf2Q8BZT2 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sh3rf2Q8BZT2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sh3rf2Q8BZT2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sh3rf2Q8BZT2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sh3rf2Q8BZT2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sh3rf2Q8BZT2 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Gm11560-201ENSMUST00000117567 948 ntBASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Gm19587-201ENSMUST00000191395 545 ntBASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Gm35713-201ENSMUST00000210516 199 ntBASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Gm10020-201ENSMUST00000081993 612 ntBASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Sh3rf2Q8BZT2 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sh3rf2Q8BZT2 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms