Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Smco3Q8BQM7 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Gm13297-201ENSMUST00000120205 934 ntBASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Gm25261-201ENSMUST00000157416 134 ntBASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Auts2-212ENSMUST00000178555 309 ntBASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco3Q8BQM7 Cgnl1-201ENSMUST00000072899 6754 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Zbtb34-202ENSMUST00000113158 6602 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Gm37048-201ENSMUST00000194827 5578 ntBASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Gm8036-201ENSMUST00000118089 1718 ntBASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Gm44062-201ENSMUST00000203312 4857 ntBASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Gm6439-201ENSMUST00000199849 862 ntBASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.26□□□□□ -0.93
Smco3Q8BQM7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms