Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.01□□□□□ -0.49
Trim6Q8BGE7 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Gm44573-201ENSMUST00000191753 2370 ntBASIC12□□□□□ -0.49
Trim6Q8BGE7 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim6Q8BGE7 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim6Q8BGE7 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC12□□□□□ -0.49
Trim6Q8BGE7 Gm13296-201ENSMUST00000117854 997 ntBASIC12□□□□□ -0.49
Trim6Q8BGE7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trim6Q8BGE7 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Gm23958-201ENSMUST00000157207 105 ntBASIC12□□□□□ -0.49
Trim6Q8BGE7 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim6Q8BGE7 Gm34767-201ENSMUST00000191813 1062 ntBASIC12□□□□□ -0.49
Trim6Q8BGE7 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim6Q8BGE7 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC12□□□□□ -0.49
Trim6Q8BGE7 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12□□□□□ -0.49
Trim6Q8BGE7 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12□□□□□ -0.49
Trim6Q8BGE7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12□□□□□ -0.49
Trim6Q8BGE7 Gm18615-201ENSMUST00000222919 1031 ntBASIC12□□□□□ -0.49
Trim6Q8BGE7 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Gm10478-201ENSMUST00000084451 396 ntBASIC12□□□□□ -0.49
Trim6Q8BGE7 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12□□□□□ -0.49
Trim6Q8BGE7 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12□□□□□ -0.49
Trim6Q8BGE7 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Trim6Q8BGE7 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC12□□□□□ -0.49
Trim6Q8BGE7 Gm45199-201ENSMUST00000207640 1507 ntBASIC12□□□□□ -0.49
Trim6Q8BGE7 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim6Q8BGE7 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
Trim6Q8BGE7 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12□□□□□ -0.49
Trim6Q8BGE7 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trim6Q8BGE7 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Gm14071-201ENSMUST00000117817 509 ntBASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Gm12463-201ENSMUST00000118271 849 ntBASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Gm4310-201ENSMUST00000177847 889 ntBASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Gm8343-201ENSMUST00000182705 994 ntBASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.99□□□□□ -0.49
Trim6Q8BGE7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Gm17827-201ENSMUST00000211825 742 ntBASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Gm7940-201ENSMUST00000218195 769 ntBASIC11.99□□□□□ -0.49
Trim6Q8BGE7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim6Q8BGE7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms