Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Snrnp40Q6PE01 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
Snrnp40Q6PE01 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Snrnp40Q6PE01 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Snrnp40Q6PE01 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Snrnp40Q6PE01 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Snrnp40Q6PE01 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Snrnp40Q6PE01 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Snrnp40Q6PE01 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Snrnp40Q6PE01 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Snrnp40Q6PE01 Gm15617-201ENSMUST00000118973 771 ntBASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Gm17796-201ENSMUST00000189015 1213 ntBASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Gm7192-201ENSMUST00000210793 1137 ntBASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 AC105408.1-201ENSMUST00000227771 802 ntBASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Snrnp40Q6PE01 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm23255-201ENSMUST00000102244 110 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm23769-201ENSMUST00000104441 121 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm11952-201ENSMUST00000121172 821 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm14113-201ENSMUST00000121399 976 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm5395-201ENSMUST00000121650 915 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Snord55-201ENSMUST00000174939 79 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm27440-201ENSMUST00000184785 107 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm19918-201ENSMUST00000194858 400 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm26782-203ENSMUST00000227103 751 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 AC156790.2-201ENSMUST00000227115 568 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm7589-201ENSMUST00000085631 534 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm12912-201ENSMUST00000121596 1381 ntBASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Snrnp40Q6PE01 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms