Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Gm2546-201ENSMUST00000182630 991 ntBASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 CT025645.2-201ENSMUST00000223278 3827 ntBASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Micall2-204ENSMUST00000170773 3157 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rnf220Q6PDX6 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Gm10748-202ENSMUST00000194396 2379 ntBASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Gm22018-201ENSMUST00000104357 131 ntBASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Gm14247-201ENSMUST00000120950 237 ntBASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Gm14832-201ENSMUST00000121289 322 ntBASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Gm25043-201ENSMUST00000158604 212 ntBASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Snora78-201ENSMUST00000158630 128 ntBASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Gm5370-201ENSMUST00000187187 574 ntBASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Gm37008-201ENSMUST00000195712 319 ntBASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Gm42826-201ENSMUST00000197548 2639 ntBASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Gad1-201ENSMUST00000094934 3355 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Gm21817-201ENSMUST00000178584 2583 ntBASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Rnf220Q6PDX6 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf220Q6PDX6 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms