Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.32□□□□□ -0.44
Smchd1Q6P5D8 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smchd1Q6P5D8 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smchd1Q6P5D8 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.32□□□□□ -0.44
Smchd1Q6P5D8 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smchd1Q6P5D8 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smchd1Q6P5D8 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smchd1Q6P5D8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smchd1Q6P5D8 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smchd1Q6P5D8 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smchd1Q6P5D8 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Gm8255-201ENSMUST00000218693 305 ntBASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Gm40879-201ENSMUST00000220759 612 ntBASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smchd1Q6P5D8 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Gm26272-201ENSMUST00000179241 132 ntBASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Gm13549-201ENSMUST00000118339 796 ntBASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Gm25545-201ENSMUST00000122673 323 ntBASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Gm16165-201ENSMUST00000160140 795 ntBASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Gm20781-201ENSMUST00000193154 693 ntBASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Gm21736-201ENSMUST00000195399 693 ntBASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Gm7880-201ENSMUST00000203748 871 ntBASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smchd1Q6P5D8 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smchd1Q6P5D8 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms