Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tpm4Q6IRU2 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Gm43758-201ENSMUST00000199500 367 ntBASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Gm19040-201ENSMUST00000203280 4726 ntBASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Tpm4Q6IRU2 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Gm11509-201ENSMUST00000117358 325 ntBASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Gm11663-201ENSMUST00000117888 290 ntBASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Gm12463-201ENSMUST00000118271 849 ntBASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Gm11783-201ENSMUST00000119549 885 ntBASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Gm44008-201ENSMUST00000204345 412 ntBASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm4Q6IRU2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms