Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm14208-201ENSMUST00000119645 678 ntBASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Gm27341-201ENSMUST00000183570 106 ntBASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Krt39Q6IFX4 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 AC154171.2-201ENSMUST00000225219 2652 ntBASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Gm14028-201ENSMUST00000117434 479 ntBASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Gm15617-201ENSMUST00000118973 771 ntBASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Gm16505-201ENSMUST00000179981 232 ntBASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt39Q6IFX4 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.46□□□□□ -0.41
Krt39Q6IFX4 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Olfml3-204ENSMUST00000169286 874 ntBASIC12.46□□□□□ -0.41
Krt39Q6IFX4 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Gm18730-201ENSMUST00000218038 343 ntBASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt39Q6IFX4 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Krt39Q6IFX4 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Krt39Q6IFX4 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.46□□□□□ -0.42
Krt39Q6IFX4 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Krt39Q6IFX4 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Krt39Q6IFX4 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Krt39Q6IFX4 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Krt39Q6IFX4 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Krt39Q6IFX4 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Krt39Q6IFX4 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 AA474408-201ENSMUST00000098110 3339 ntBASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Krt39Q6IFX4 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms