Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Clcn1Q64347 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC14.43□□□□□ -0.1
Clcn1Q64347 Gm15197-201ENSMUST00000120526 478 ntBASIC14.43□□□□□ -0.1
Clcn1Q64347 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 Gm24992-201ENSMUST00000157412 130 ntBASIC14.43□□□□□ -0.1
Clcn1Q64347 Gm25830-201ENSMUST00000158923 132 ntBASIC14.43□□□□□ -0.1
Clcn1Q64347 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 Mir6941-201ENSMUST00000184711 59 ntBASIC14.43□□□□□ -0.1
Clcn1Q64347 Gm29747-201ENSMUST00000194764 585 ntBASIC14.43□□□□□ -0.1
Clcn1Q64347 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.43□□□□□ -0.1
Clcn1Q64347 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Clcn1Q64347 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC14.43□□□□□ -0.1
Clcn1Q64347 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Clcn1Q64347 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC14.43□□□□□ -0.1
Clcn1Q64347 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Clcn1Q64347 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcn1Q64347 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Clcn1Q64347 BC043934-202ENSMUST00000185694 2356 ntBASIC14.42□□□□□ -0.1
Clcn1Q64347 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.42□□□□□ -0.1
Clcn1Q64347 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Clcn1Q64347 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.42□□□□□ -0.1
Clcn1Q64347 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC14.42□□□□□ -0.1
Clcn1Q64347 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm12943-201ENSMUST00000119616 210 ntBASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm6548-201ENSMUST00000167498 1165 ntBASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm17070-201ENSMUST00000170463 784 ntBASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clcn1Q64347 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm37629-201ENSMUST00000193635 1050 ntBASIC14.42□□□□□ -0.1
Clcn1Q64347 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm44216-201ENSMUST00000203942 157 ntBASIC14.42□□□□□ -0.1
Clcn1Q64347 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC14.42□□□□□ -0.1
Clcn1Q64347 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm8181-201ENSMUST00000062242 669 ntBASIC14.42□□□□□ -0.1
Clcn1Q64347 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm38273-201ENSMUST00000194987 2382 ntBASIC14.42□□□□□ -0.1
Clcn1Q64347 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clcn1Q64347 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.41□□□□□ -0.1
Clcn1Q64347 Btrc-209ENSMUST00000224478 2194 ntBASIC14.41□□□□□ -0.1
Clcn1Q64347 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn1Q64347 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn1Q64347 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn1Q64347 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.41□□□□□ -0.1
Clcn1Q64347 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.41□□□□□ -0.1
Clcn1Q64347 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn1Q64347 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn1Q64347 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn1Q64347 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.41□□□□□ -0.1
Clcn1Q64347 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Clcn1Q64347 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn1Q64347 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC14.41□□□□□ -0.1
Clcn1Q64347 Gm14274-201ENSMUST00000117182 615 ntBASIC14.41□□□□□ -0.1
Clcn1Q64347 Gm12218-201ENSMUST00000117666 399 ntBASIC14.41□□□□□ -0.1
Clcn1Q64347 Gm12663-201ENSMUST00000118481 958 ntBASIC14.41□□□□□ -0.1
Clcn1Q64347 Gm16219-201ENSMUST00000120096 274 ntBASIC14.41□□□□□ -0.1
Clcn1Q64347 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC14.41□□□□□ -0.1
Clcn1Q64347 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC14.41□□□□□ -0.1
Clcn1Q64347 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clcn1Q64347 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC14.41□□□□□ -0.1
Clcn1Q64347 Gm4982-201ENSMUST00000160440 1098 ntBASIC14.41□□□□□ -0.1
Clcn1Q64347 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC14.41□□□□□ -0.1
Clcn1Q64347 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms