Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ift88Q61371 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Ift88Q61371 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.47□□□□□ -0.41
Ift88Q61371 Gm25881-201ENSMUST00000157783 103 ntBASIC12.47□□□□□ -0.41
Ift88Q61371 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.47□□□□□ -0.41
Ift88Q61371 Gm18734-201ENSMUST00000172937 808 ntBASIC12.47□□□□□ -0.41
Ift88Q61371 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.47□□□□□ -0.41
Ift88Q61371 Gm8100-201ENSMUST00000182906 988 ntBASIC12.47□□□□□ -0.41
Ift88Q61371 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.47□□□□□ -0.41
Ift88Q61371 Gm43630-201ENSMUST00000201550 776 ntBASIC12.47□□□□□ -0.41
Ift88Q61371 Gm42867-201ENSMUST00000202995 469 ntBASIC12.47□□□□□ -0.41
Ift88Q61371 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.47□□□□□ -0.41
Ift88Q61371 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ift88Q61371 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.47□□□□□ -0.41
Ift88Q61371 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ift88Q61371 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Ift88Q61371 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ift88Q61371 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Ift88Q61371 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.46□□□□□ -0.41
Ift88Q61371 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.46□□□□□ -0.41
Ift88Q61371 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ift88Q61371 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.46□□□□□ -0.41
Ift88Q61371 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Ift88Q61371 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.46□□□□□ -0.41
Ift88Q61371 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.46□□□□□ -0.41
Ift88Q61371 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Gm10288-201ENSMUST00000084614 537 ntBASIC12.46□□□□□ -0.41
Ift88Q61371 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ift88Q61371 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ift88Q61371 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.46□□□□□ -0.42
Ift88Q61371 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ift88Q61371 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ift88Q61371 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.46□□□□□ -0.42
Ift88Q61371 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.46□□□□□ -0.42
Ift88Q61371 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ift88Q61371 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ift88Q61371 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Ift88Q61371 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ift88Q61371 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ift88Q61371 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ift88Q61371 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.46□□□□□ -0.42
Ift88Q61371 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ift88Q61371 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.45□□□□□ -0.42
Ift88Q61371 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ift88Q61371 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ift88Q61371 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.45□□□□□ -0.42
Ift88Q61371 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ift88Q61371 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ift88Q61371 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ift88Q61371 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ift88Q61371 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.45□□□□□ -0.42
Ift88Q61371 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.45□□□□□ -0.42
Ift88Q61371 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ift88Q61371 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Ift88Q61371 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ift88Q61371 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ift88Q61371 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ift88Q61371 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ift88Q61371 Gm15198-201ENSMUST00000117283 177 ntBASIC12.45□□□□□ -0.42
Ift88Q61371 Gm13916-201ENSMUST00000117368 628 ntBASIC12.45□□□□□ -0.42
Ift88Q61371 Gm12247-201ENSMUST00000117585 670 ntBASIC12.45□□□□□ -0.42
Ift88Q61371 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms