Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.83□□□□□ -0.68
Col12a1Q60847 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.83□□□□□ -0.68
Col12a1Q60847 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col12a1Q60847 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Col12a1Q60847 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC10.82□□□□□ -0.68
Col12a1Q60847 Zkscan7-205ENSMUST00000216462 990 ntBASIC10.82□□□□□ -0.68
Col12a1Q60847 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Gm9864-201ENSMUST00000090043 1656 ntBASIC10.82□□□□□ -0.68
Col12a1Q60847 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.82□□□□□ -0.68
Col12a1Q60847 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.82□□□□□ -0.68
Col12a1Q60847 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Col12a1Q60847 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Gm3355-201ENSMUST00000160079 487 ntBASIC10.82□□□□□ -0.68
Col12a1Q60847 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC10.82□□□□□ -0.68
Col12a1Q60847 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Gm44388-201ENSMUST00000204350 258 ntBASIC10.82□□□□□ -0.68
Col12a1Q60847 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Col12a1Q60847 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Col12a1Q60847 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC10.82□□□□□ -0.68
Col12a1Q60847 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 AC147366.2-201ENSMUST00000226859 2038 ntBASIC10.82□□□□□ -0.68
Col12a1Q60847 Gm44664-201ENSMUST00000206841 1786 ntBASIC10.82□□□□□ -0.68
Col12a1Q60847 Gm22900-201ENSMUST00000104538 130 ntBASIC10.82□□□□□ -0.68
Col12a1Q60847 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Col12a1Q60847 Gm15702-201ENSMUST00000119680 444 ntBASIC10.82□□□□□ -0.68
Col12a1Q60847 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Col12a1Q60847 Gm25735-201ENSMUST00000175164 215 ntBASIC10.82□□□□□ -0.68
Col12a1Q60847 Gm5274-201ENSMUST00000182641 1003 ntBASIC10.82□□□□□ -0.68
Col12a1Q60847 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Col12a1Q60847 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC10.82□□□□□ -0.68
Col12a1Q60847 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC10.82□□□□□ -0.68
Col12a1Q60847 Gm28653-202ENSMUST00000227082 521 ntBASIC10.82□□□□□ -0.68
Col12a1Q60847 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.82□□□□□ -0.68
Col12a1Q60847 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col12a1Q60847 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Col12a1Q60847 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.81□□□□□ -0.68
Col12a1Q60847 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.81□□□□□ -0.68
Col12a1Q60847 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.81□□□□□ -0.68
Col12a1Q60847 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.81□□□□□ -0.68
Col12a1Q60847 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Gm20281-201ENSMUST00000188225 267 ntBASIC10.81□□□□□ -0.68
Col12a1Q60847 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC10.81□□□□□ -0.68
Col12a1Q60847 Gm33080-201ENSMUST00000205429 172 ntBASIC10.81□□□□□ -0.68
Col12a1Q60847 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC10.81□□□□□ -0.68
Col12a1Q60847 CR974487.1-201ENSMUST00000220984 413 ntBASIC10.81□□□□□ -0.68
Col12a1Q60847 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.81□□□□□ -0.68
Col12a1Q60847 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.81□□□□□ -0.68
Col12a1Q60847 Gm26021-201ENSMUST00000158664 131 ntBASIC10.81□□□□□ -0.68
Col12a1Q60847 Gm23563-201ENSMUST00000174900 251 ntBASIC10.81□□□□□ -0.68
Col12a1Q60847 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Col12a1Q60847 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.81□□□□□ -0.68
Col12a1Q60847 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Gm43362-201ENSMUST00000198192 2470 ntBASIC10.81□□□□□ -0.68
Col12a1Q60847 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col12a1Q60847 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms