Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm9369-201ENSMUST00000196009 733 ntBASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm18059-201ENSMUST00000208073 580 ntBASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm45120-201ENSMUST00000208880 408 ntBASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 AC154757.2-201ENSMUST00000228885 743 ntBASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rc3h1Q4VGL6 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Gm42535-201ENSMUST00000197312 1399 ntBASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Gm12179-201ENSMUST00000118344 1272 ntBASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 AC154589.2-201ENSMUST00000228847 251 ntBASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Gm5805-201ENSMUST00000072779 456 ntBASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rc3h1Q4VGL6 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Gm9673-201ENSMUST00000119287 781 ntBASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Gm12274-201ENSMUST00000120062 385 ntBASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Gm22379-201ENSMUST00000157480 131 ntBASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Gm42919-201ENSMUST00000197753 1284 ntBASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Gm7082-201ENSMUST00000209880 969 ntBASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Gm26226-201ENSMUST00000082509 116 ntBASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rc3h1Q4VGL6 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms