Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Capsl-202ENSMUST00000226688 739 ntBASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.22□□□□□ -0.29
Ddx49Q4FZF3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Gm6630-201ENSMUST00000119199 454 ntBASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Gm13981-201ENSMUST00000122360 447 ntBASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx49Q4FZF3 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx49Q4FZF3 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx49Q4FZF3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx49Q4FZF3 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ddx49Q4FZF3 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC13.21□□□□□ -0.3
Ddx49Q4FZF3 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.21□□□□□ -0.3
Ddx49Q4FZF3 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx49Q4FZF3 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.21□□□□□ -0.3
Ddx49Q4FZF3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Ddx49Q4FZF3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx49Q4FZF3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx49Q4FZF3 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC13.21□□□□□ -0.3
Ddx49Q4FZF3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Gm6158-201ENSMUST00000109467 904 ntBASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Gm12389-201ENSMUST00000117696 418 ntBASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Gm11960-201ENSMUST00000122068 925 ntBASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Gm24992-201ENSMUST00000157412 130 ntBASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Gm26272-201ENSMUST00000179241 132 ntBASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Mir7035-201ENSMUST00000184713 82 ntBASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Gm43854-201ENSMUST00000200418 394 ntBASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ddx49Q4FZF3 Gm18035-201ENSMUST00000211962 589 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms