Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Gm12684-201ENSMUST00000118675 999 ntBASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Gm11736-201ENSMUST00000121468 505 ntBASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Gm6216-201ENSMUST00000182390 687 ntBASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Gm5254-201ENSMUST00000188353 977 ntBASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fam196aQ3USH1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Gm8464-202ENSMUST00000146697 1142 ntBASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Gm4750-201ENSMUST00000151942 1142 ntBASIC11.42□□□□□ -0.58
Fam196aQ3USH1 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC11.42□□□□□ -0.58
Fam196aQ3USH1 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Gm9644-201ENSMUST00000212828 1183 ntBASIC11.42□□□□□ -0.58
Fam196aQ3USH1 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Gm7589-201ENSMUST00000085631 534 ntBASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fam196aQ3USH1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fam196aQ3USH1 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fam196aQ3USH1 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fam196aQ3USH1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fam196aQ3USH1 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fam196aQ3USH1 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms