Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm9864-201ENSMUST00000090043 1656 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm14048-201ENSMUST00000121864 1268 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm12254-201ENSMUST00000134617 471 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm21963-201ENSMUST00000179519 330 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm37486-201ENSMUST00000195663 405 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm18862-201ENSMUST00000204643 933 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 AC151971.6-201ENSMUST00000216193 866 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 AC139155.1-201ENSMUST00000226043 444 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm25514-201ENSMUST00000083860 135 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm16410-201ENSMUST00000094550 774 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Gm14538-201ENSMUST00000122019 1327 ntBASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Spg11Q3UHA3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm38034-201ENSMUST00000193915 2069 ntBASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 E030025P04Rik-201ENSMUST00000106710 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm22669-201ENSMUST00000158723 318 ntBASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm9273-201ENSMUST00000200606 715 ntBASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm18119-201ENSMUST00000219972 616 ntBASIC10.36□□□□□ -0.75
Spg11Q3UHA3 AC174647.1-201ENSMUST00000227419 1271 ntBASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm24146-201ENSMUST00000082760 321 ntBASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm11231-201ENSMUST00000117895 1706 ntBASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm5270-201ENSMUST00000121506 1002 ntBASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Mir8104-201ENSMUST00000185165 101 ntBASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm35412-201ENSMUST00000220437 999 ntBASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm10537-201ENSMUST00000192625 1698 ntBASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Spg11Q3UHA3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms