Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gm15515-201ENSMUST00000117827 822 ntBASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gm15595-201ENSMUST00000120840 961 ntBASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gm24844-201ENSMUST00000158679 127 ntBASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gm12407-201ENSMUST00000180219 324 ntBASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gm29499-201ENSMUST00000189151 486 ntBASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gm28329-201ENSMUST00000191208 689 ntBASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gm29171-201ENSMUST00000191397 486 ntBASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gm8342-201ENSMUST00000209839 757 ntBASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cul4aQ3TCH7 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cul4aQ3TCH7 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Gm22711-201ENSMUST00000116890 133 ntBASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Gm12501-201ENSMUST00000119163 529 ntBASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Gm43058-201ENSMUST00000197645 625 ntBASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Gm18730-201ENSMUST00000218038 343 ntBASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Gm8385-201ENSMUST00000058999 643 ntBASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cul4aQ3TCH7 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Gm12218-201ENSMUST00000117666 399 ntBASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Gm14208-201ENSMUST00000119645 678 ntBASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms