Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm44999-201ENSMUST00000207456 1493 ntBASIC9.4□□□□□ -0.91
Tff1Q08423 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.4□□□□□ -0.91
Tff1Q08423 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Tff1Q08423 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Tff1Q08423 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Tff1Q08423 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Tff1Q08423 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.39□□□□□ -0.91
Tff1Q08423 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.39□□□□□ -0.91
Tff1Q08423 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.39□□□□□ -0.91
Tff1Q08423 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.39□□□□□ -0.91
Tff1Q08423 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Tff1Q08423 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Gm23949-201ENSMUST00000104027 127 ntBASIC9.39□□□□□ -0.91
Tff1Q08423 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Tff1Q08423 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.39□□□□□ -0.91
Tff1Q08423 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Tff1Q08423 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Gm11509-201ENSMUST00000117358 325 ntBASIC9.39□□□□□ -0.91
Tff1Q08423 Gm14071-201ENSMUST00000117817 509 ntBASIC9.39□□□□□ -0.91
Tff1Q08423 Gm11660-201ENSMUST00000120955 412 ntBASIC9.39□□□□□ -0.91
Tff1Q08423 Gm6039-201ENSMUST00000121667 1250 ntBASIC9.39□□□□□ -0.91
Tff1Q08423 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC9.39□□□□□ -0.91
Tff1Q08423 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9.39□□□□□ -0.91
Tff1Q08423 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.39□□□□□ -0.91
Tff1Q08423 Gm5778-201ENSMUST00000171003 1072 ntBASIC9.39□□□□□ -0.91
Tff1Q08423 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Tff1Q08423 Mir6958-201ENSMUST00000184207 73 ntBASIC9.39□□□□□ -0.91
Tff1Q08423 Gm9540-201ENSMUST00000188230 478 ntBASIC9.39□□□□□ -0.91
Tff1Q08423 Gm7600-201ENSMUST00000209657 785 ntBASIC9.39□□□□□ -0.91
Tff1Q08423 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC9.39□□□□□ -0.91
Tff1Q08423 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.39□□□□□ -0.91
Tff1Q08423 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Tff1Q08423 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.39□□□□□ -0.91
Tff1Q08423 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.39□□□□□ -0.91
Tff1Q08423 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Tff1Q08423 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Tff1Q08423 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Tff1Q08423 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Tff1Q08423 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Tff1Q08423 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC9.38□□□□□ -0.91
Tff1Q08423 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Tff1Q08423 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.38□□□□□ -0.91
Tff1Q08423 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Tff1Q08423 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.38□□□□□ -0.91
Tff1Q08423 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Tff1Q08423 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.38□□□□□ -0.91
Tff1Q08423 Gm13045-201ENSMUST00000119019 712 ntBASIC9.38□□□□□ -0.91
Tff1Q08423 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Tff1Q08423 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.38□□□□□ -0.91
Tff1Q08423 Gm4310-201ENSMUST00000177847 889 ntBASIC9.38□□□□□ -0.91
Tff1Q08423 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms