Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm6108-201ENSMUST00000208365 367 ntBASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm9797-202ENSMUST00000218003 294 ntBASIC8.77□□□□□ -1.01
Cdx4Q07424 AC154290.1-201ENSMUST00000223786 1240 ntBASIC8.77□□□□□ -1.01
Cdx4Q07424 AC159103.1-201ENSMUST00000228325 429 ntBASIC8.77□□□□□ -1.01
Cdx4Q07424 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm10179-201ENSMUST00000086233 688 ntBASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm5537-201ENSMUST00000091117 1252 ntBASIC8.77□□□□□ -1.01
Cdx4Q07424 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm7642-201ENSMUST00000216345 1809 ntBASIC8.77□□□□□ -1.01
Cdx4Q07424 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Cdx4Q07424 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Cdx4Q07424 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Gm6157-201ENSMUST00000199935 1897 ntBASIC8.77□□□□□ -1.01
Cdx4Q07424 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC8.77□□□□□ -1.01
Cdx4Q07424 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Cdx4Q07424 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm43242-201ENSMUST00000199507 1776 ntBASIC8.76□□□□□ -1.01
Cdx4Q07424 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm13888-201ENSMUST00000119148 422 ntBASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm8199-201ENSMUST00000121323 823 ntBASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm14665-201ENSMUST00000122294 557 ntBASIC8.76□□□□□ -1.01
Cdx4Q07424 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC8.76□□□□□ -1.01
Cdx4Q07424 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm29499-201ENSMUST00000189151 486 ntBASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm28329-201ENSMUST00000191208 689 ntBASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm29171-201ENSMUST00000191397 486 ntBASIC8.76□□□□□ -1.01
Cdx4Q07424 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm9132-201ENSMUST00000210182 832 ntBASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm45575-201ENSMUST00000210283 548 ntBASIC8.76□□□□□ -1.01
Cdx4Q07424 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm45770-201ENSMUST00000212105 616 ntBASIC8.76□□□□□ -1.01
Cdx4Q07424 AC151275.1-201ENSMUST00000224870 585 ntBASIC8.76□□□□□ -1.01
Cdx4Q07424 Mir219a-1-201ENSMUST00000083621 110 ntBASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 AC122811.1-201ENSMUST00000222257 2921 ntBASIC8.76□□□□□ -1.01
Cdx4Q07424 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Cdx4Q07424 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Cdx4Q07424 Gm37348-201ENSMUST00000193104 1789 ntBASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms