Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Gm7851-201ENSMUST00000117574 323 ntBASIC11.37□□□□□ -0.59
Pfdn6Q03958 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.37□□□□□ -0.59
Pfdn6Q03958 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Gm8459-201ENSMUST00000162504 760 ntBASIC11.37□□□□□ -0.59
Pfdn6Q03958 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.37□□□□□ -0.59
Pfdn6Q03958 Gm12407-201ENSMUST00000180219 324 ntBASIC11.37□□□□□ -0.59
Pfdn6Q03958 Gm43852-201ENSMUST00000202098 917 ntBASIC11.37□□□□□ -0.59
Pfdn6Q03958 Gm45856-201ENSMUST00000212752 416 ntBASIC11.37□□□□□ -0.59
Pfdn6Q03958 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.37□□□□□ -0.59
Pfdn6Q03958 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.37□□□□□ -0.59
Pfdn6Q03958 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pfdn6Q03958 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.36□□□□□ -0.59
Pfdn6Q03958 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Gm7857-201ENSMUST00000117957 358 ntBASIC11.36□□□□□ -0.59
Pfdn6Q03958 Gm12579-201ENSMUST00000118040 783 ntBASIC11.36□□□□□ -0.59
Pfdn6Q03958 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Gm20495-201ENSMUST00000173902 235 ntBASIC11.36□□□□□ -0.59
Pfdn6Q03958 Gm7741-201ENSMUST00000181445 989 ntBASIC11.36□□□□□ -0.59
Pfdn6Q03958 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.36□□□□□ -0.59
Pfdn6Q03958 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.36□□□□□ -0.59
Pfdn6Q03958 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.36□□□□□ -0.59
Pfdn6Q03958 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.36□□□□□ -0.59
Pfdn6Q03958 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pfdn6Q03958 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms