Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
GabpaQ00422 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.8□□□□□ -0.36
GabpaQ00422 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
GabpaQ00422 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
GabpaQ00422 Gm12663-201ENSMUST00000118481 958 ntBASIC12.8□□□□□ -0.36
GabpaQ00422 Gm14213-201ENSMUST00000119778 768 ntBASIC12.8□□□□□ -0.36
GabpaQ00422 Gm14165-201ENSMUST00000121456 952 ntBASIC12.8□□□□□ -0.36
GabpaQ00422 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.8□□□□□ -0.36
GabpaQ00422 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
GabpaQ00422 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
GabpaQ00422 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.8□□□□□ -0.36
GabpaQ00422 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.8□□□□□ -0.36
GabpaQ00422 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.8□□□□□ -0.36
GabpaQ00422 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.8□□□□□ -0.36
GabpaQ00422 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.8□□□□□ -0.36
GabpaQ00422 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
GabpaQ00422 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.8□□□□□ -0.36
GabpaQ00422 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GabpaQ00422 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
GabpaQ00422 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
GabpaQ00422 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
GabpaQ00422 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
GabpaQ00422 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Gm24791-201ENSMUST00000104284 131 ntBASIC12.79□□□□□ -0.36
GabpaQ00422 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Gm6158-201ENSMUST00000109467 904 ntBASIC12.79□□□□□ -0.36
GabpaQ00422 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.79□□□□□ -0.36
GabpaQ00422 Gm14234-201ENSMUST00000119539 845 ntBASIC12.79□□□□□ -0.36
GabpaQ00422 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.79□□□□□ -0.36
GabpaQ00422 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.79□□□□□ -0.36
GabpaQ00422 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.79□□□□□ -0.36
GabpaQ00422 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.79□□□□□ -0.36
GabpaQ00422 Gm7719-201ENSMUST00000182374 975 ntBASIC12.79□□□□□ -0.36
GabpaQ00422 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.79□□□□□ -0.36
GabpaQ00422 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.79□□□□□ -0.36
GabpaQ00422 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.79□□□□□ -0.36
GabpaQ00422 Capsl-202ENSMUST00000226688 739 ntBASIC12.79□□□□□ -0.36
GabpaQ00422 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.79□□□□□ -0.36
GabpaQ00422 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
GabpaQ00422 Matn2-203ENSMUST00000226766 3252 ntBASIC12.79□□□□□ -0.36
GabpaQ00422 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.79□□□□□ -0.36
GabpaQ00422 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.79□□□□□ -0.36
GabpaQ00422 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GabpaQ00422 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
GabpaQ00422 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.78□□□□□ -0.36
GabpaQ00422 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.78□□□□□ -0.36
GabpaQ00422 Gm18201-201ENSMUST00000174735 875 ntBASIC12.78□□□□□ -0.36
GabpaQ00422 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.78□□□□□ -0.36
GabpaQ00422 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.78□□□□□ -0.36
GabpaQ00422 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.78□□□□□ -0.36
GabpaQ00422 Gm9487-201ENSMUST00000216600 472 ntBASIC12.78□□□□□ -0.36
GabpaQ00422 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.78□□□□□ -0.36
GabpaQ00422 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.78□□□□□ -0.36
GabpaQ00422 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms