Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Gm11340-201ENSMUST00000119226 412 ntBASIC11.66□□□□□ -0.54
Smad1P70340 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.66□□□□□ -0.54
Smad1P70340 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.66□□□□□ -0.54
Smad1P70340 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.66□□□□□ -0.54
Smad1P70340 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.66□□□□□ -0.54
Smad1P70340 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Smad1P70340 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.66□□□□□ -0.54
Smad1P70340 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.66□□□□□ -0.54
Smad1P70340 Gm8100-201ENSMUST00000182906 988 ntBASIC11.66□□□□□ -0.54
Smad1P70340 Gm3332-201ENSMUST00000189337 928 ntBASIC11.66□□□□□ -0.54
Smad1P70340 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.66□□□□□ -0.54
Smad1P70340 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.66□□□□□ -0.54
Smad1P70340 Gm4157-201ENSMUST00000211647 679 ntBASIC11.66□□□□□ -0.54
Smad1P70340 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Gm807-202ENSMUST00000224929 408 ntBASIC11.66□□□□□ -0.54
Smad1P70340 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.66□□□□□ -0.54
Smad1P70340 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.66□□□□□ -0.54
Smad1P70340 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smad1P70340 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.66□□□□□ -0.54
Smad1P70340 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.66□□□□□ -0.54
Smad1P70340 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smad1P70340 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smad1P70340 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Smad1P70340 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smad1P70340 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smad1P70340 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smad1P70340 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Smad1P70340 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smad1P70340 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.65□□□□□ -0.54
Smad1P70340 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.65□□□□□ -0.54
Smad1P70340 Gm14724-201ENSMUST00000118400 537 ntBASIC11.65□□□□□ -0.54
Smad1P70340 Gm11660-201ENSMUST00000120955 412 ntBASIC11.65□□□□□ -0.54
Smad1P70340 Mir1901-201ENSMUST00000122616 78 ntBASIC11.65□□□□□ -0.54
Smad1P70340 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.65□□□□□ -0.54
Smad1P70340 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smad1P70340 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smad1P70340 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.65□□□□□ -0.54
Smad1P70340 Gm34023-201ENSMUST00000195539 217 ntBASIC11.65□□□□□ -0.54
Smad1P70340 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.65□□□□□ -0.54
Smad1P70340 Gm2965-201ENSMUST00000198365 343 ntBASIC11.65□□□□□ -0.54
Smad1P70340 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.65□□□□□ -0.54
Smad1P70340 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.65□□□□□ -0.54
Smad1P70340 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smad1P70340 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smad1P70340 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smad1P70340 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smad1P70340 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smad1P70340 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smad1P70340 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.65□□□□□ -0.54
Smad1P70340 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smad1P70340 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smad1P70340 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.65□□□□□ -0.54
Smad1P70340 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smad1P70340 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smad1P70340 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smad1P70340 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smad1P70340 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Smad1P70340 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Smad1P70340 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Smad1P70340 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Smad1P70340 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.64□□□□□ -0.55
Smad1P70340 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Smad1P70340 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.64□□□□□ -0.55
Smad1P70340 Gm13809-201ENSMUST00000117921 597 ntBASIC11.64□□□□□ -0.55
Smad1P70340 Gm15573-201ENSMUST00000119487 540 ntBASIC11.64□□□□□ -0.55
Smad1P70340 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.64□□□□□ -0.55
Smad1P70340 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.64□□□□□ -0.55
Smad1P70340 Gm22138-201ENSMUST00000158748 128 ntBASIC11.64□□□□□ -0.55
Smad1P70340 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.64□□□□□ -0.55
Smad1P70340 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smad1P70340 Gm25072-201ENSMUST00000175233 235 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms