Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.12□□□□□ -0.79
Abcd3P55096 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.12□□□□□ -0.79
Abcd3P55096 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.12□□□□□ -0.79
Abcd3P55096 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.12□□□□□ -0.79
Abcd3P55096 Gm11244-201ENSMUST00000121243 237 ntBASIC10.12□□□□□ -0.79
Abcd3P55096 Gm9089-201ENSMUST00000122027 526 ntBASIC10.12□□□□□ -0.79
Abcd3P55096 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.12□□□□□ -0.79
Abcd3P55096 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.12□□□□□ -0.79
Abcd3P55096 Gm10774-201ENSMUST00000188689 204 ntBASIC10.12□□□□□ -0.79
Abcd3P55096 Gm42997-202ENSMUST00000200321 985 ntBASIC10.12□□□□□ -0.79
Abcd3P55096 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.12□□□□□ -0.79
Abcd3P55096 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Abcd3P55096 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.12□□□□□ -0.79
Abcd3P55096 Ginm1-202ENSMUST00000065124 300 ntBASIC10.12□□□□□ -0.79
Abcd3P55096 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Abcd3P55096 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Abcd3P55096 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.12□□□□□ -0.79
Abcd3P55096 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Abcd3P55096 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Abcd3P55096 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Abcd3P55096 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Abcd3P55096 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.12□□□□□ -0.79
Abcd3P55096 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Abcd3P55096 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Abcd3P55096 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Abcd3P55096 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
Abcd3P55096 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.11□□□□□ -0.79
Abcd3P55096 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Abcd3P55096 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Abcd3P55096 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Abcd3P55096 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC10.11□□□□□ -0.79
Abcd3P55096 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.11□□□□□ -0.79
Abcd3P55096 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Abcd3P55096 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.11□□□□□ -0.79
Abcd3P55096 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Gm18367-201ENSMUST00000176139 600 ntBASIC10.11□□□□□ -0.79
Abcd3P55096 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.11□□□□□ -0.79
Abcd3P55096 Mir6979-201ENSMUST00000183927 56 ntBASIC10.11□□□□□ -0.79
Abcd3P55096 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.11□□□□□ -0.79
Abcd3P55096 Gm43852-201ENSMUST00000202098 917 ntBASIC10.11□□□□□ -0.79
Abcd3P55096 Gm8574-201ENSMUST00000203207 924 ntBASIC10.11□□□□□ -0.79
Abcd3P55096 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.11□□□□□ -0.79
Abcd3P55096 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Olfr584-201ENSMUST00000098210 964 ntBASIC10.11□□□□□ -0.79
Abcd3P55096 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Abcd3P55096 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.11□□□□□ -0.79
Abcd3P55096 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
Abcd3P55096 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Abcd3P55096 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Abcd3P55096 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.11□□□□□ -0.79
Abcd3P55096 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Abcd3P55096 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms