Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox3P53784 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sox3P53784 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox3P53784 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.88□□□□□ -0.67
Sox3P53784 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox3P53784 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox3P53784 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sox3P53784 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox3P53784 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox3P53784 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sox3P53784 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sox3P53784 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox3P53784 Gm15003-201ENSMUST00000118884 446 ntBASIC10.88□□□□□ -0.67
Sox3P53784 Gm7722-201ENSMUST00000120646 741 ntBASIC10.88□□□□□ -0.67
Sox3P53784 Gm12030-201ENSMUST00000121917 223 ntBASIC10.88□□□□□ -0.67
Sox3P53784 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.88□□□□□ -0.67
Sox3P53784 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.88□□□□□ -0.67
Sox3P53784 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox3P53784 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Sox3P53784 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Sox3P53784 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.88□□□□□ -0.67
Sox3P53784 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox3P53784 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.88□□□□□ -0.67
Sox3P53784 Gm40879-201ENSMUST00000220759 612 ntBASIC10.88□□□□□ -0.67
Sox3P53784 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.88□□□□□ -0.67
Sox3P53784 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.88□□□□□ -0.67
Sox3P53784 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Sox3P53784 Gm5705-201ENSMUST00000066241 711 ntBASIC10.88□□□□□ -0.67
Sox3P53784 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sox3P53784 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sox3P53784 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox3P53784 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox3P53784 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox3P53784 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox3P53784 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox3P53784 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox3P53784 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sox3P53784 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.87□□□□□ -0.67
Sox3P53784 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sox3P53784 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sox3P53784 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sox3P53784 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sox3P53784 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sox3P53784 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.87□□□□□ -0.67
Sox3P53784 Gm13019-201ENSMUST00000120000 276 ntBASIC10.87□□□□□ -0.67
Sox3P53784 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Sox3P53784 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.87□□□□□ -0.67
Sox3P53784 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.87□□□□□ -0.67
Sox3P53784 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.87□□□□□ -0.67
Sox3P53784 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
Sox3P53784 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.87□□□□□ -0.67
Sox3P53784 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.87□□□□□ -0.67
Sox3P53784 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.87□□□□□ -0.67
Sox3P53784 CT573086.4-201ENSMUST00000226729 342 ntBASIC10.87□□□□□ -0.67
Sox3P53784 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox3P53784 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox3P53784 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox3P53784 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.87□□□□□ -0.67
Sox3P53784 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Sox3P53784 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.87□□□□□ -0.67
Sox3P53784 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.87□□□□□ -0.67
Sox3P53784 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Sox3P53784 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Sox3P53784 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.87□□□□□ -0.67
Sox3P53784 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.87□□□□□ -0.67
Sox3P53784 BC043934-202ENSMUST00000185694 2356 ntBASIC10.87□□□□□ -0.67
Sox3P53784 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.87□□□□□ -0.67
Sox3P53784 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox3P53784 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox3P53784 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms