Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sox1P53783 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sox1P53783 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC11.59□□□□□ -0.55
Sox1P53783 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.59□□□□□ -0.55
Sox1P53783 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sox1P53783 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.59□□□□□ -0.55
Sox1P53783 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sox1P53783 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sox1P53783 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sox1P53783 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sox1P53783 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC11.59□□□□□ -0.55
Sox1P53783 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC11.59□□□□□ -0.55
Sox1P53783 Zfp419-201ENSMUST00000173446 916 ntBASIC11.59□□□□□ -0.55
Sox1P53783 Gm20495-201ENSMUST00000173902 235 ntBASIC11.59□□□□□ -0.55
Sox1P53783 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sox1P53783 Gm8601-201ENSMUST00000182096 909 ntBASIC11.59□□□□□ -0.55
Sox1P53783 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.59□□□□□ -0.55
Sox1P53783 Gm4960-201ENSMUST00000182928 1001 ntBASIC11.59□□□□□ -0.55
Sox1P53783 Gm9523-201ENSMUST00000199146 1159 ntBASIC11.59□□□□□ -0.55
Sox1P53783 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.59□□□□□ -0.55
Sox1P53783 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC11.59□□□□□ -0.55
Sox1P53783 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Sox1P53783 Gm18621-201ENSMUST00000222677 679 ntBASIC11.59□□□□□ -0.55
Sox1P53783 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC11.59□□□□□ -0.55
Sox1P53783 AC114573.1-201ENSMUST00000224120 1210 ntBASIC11.59□□□□□ -0.55
Sox1P53783 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sox1P53783 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Sox1P53783 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.59□□□□□ -0.55
Sox1P53783 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sox1P53783 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
Sox1P53783 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC11.59□□□□□ -0.55
Sox1P53783 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.59□□□□□ -0.55
Sox1P53783 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sox1P53783 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Sox1P53783 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.58□□□□□ -0.56
Sox1P53783 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sox1P53783 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Gm44640-201ENSMUST00000206894 247 ntBASIC11.58□□□□□ -0.56
Sox1P53783 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC11.58□□□□□ -0.56
Sox1P53783 Gm17872-201ENSMUST00000222550 532 ntBASIC11.58□□□□□ -0.56
Sox1P53783 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sox1P53783 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.58□□□□□ -0.56
Sox1P53783 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sox1P53783 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sox1P53783 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox1P53783 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sox1P53783 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox1P53783 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Sox1P53783 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox1P53783 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox1P53783 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Sox1P53783 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms