Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.53□□□□□ -0.56
SftpbP50405 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Gm12196-201ENSMUST00000120954 262 ntBASIC11.53□□□□□ -0.56
SftpbP50405 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.53□□□□□ -0.56
SftpbP50405 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.53□□□□□ -0.56
SftpbP50405 Gm8459-201ENSMUST00000162504 760 ntBASIC11.53□□□□□ -0.56
SftpbP50405 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SftpbP50405 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
SftpbP50405 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.53□□□□□ -0.56
SftpbP50405 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SftpbP50405 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.53□□□□□ -0.56
SftpbP50405 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
SftpbP50405 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SftpbP50405 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SftpbP50405 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
SftpbP50405 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.53□□□□□ -0.56
SftpbP50405 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SftpbP50405 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.53□□□□□ -0.56
SftpbP50405 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.53□□□□□ -0.56
SftpbP50405 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SftpbP50405 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.53□□□□□ -0.56
SftpbP50405 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.52□□□□□ -0.56
SftpbP50405 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.52□□□□□ -0.56
SftpbP50405 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
SftpbP50405 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
SftpbP50405 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.52□□□□□ -0.57
SftpbP50405 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
SftpbP50405 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
SftpbP50405 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.52□□□□□ -0.57
SftpbP50405 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Gm25881-201ENSMUST00000157783 103 ntBASIC11.52□□□□□ -0.57
SftpbP50405 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Gm9353-201ENSMUST00000200472 604 ntBASIC11.52□□□□□ -0.57
SftpbP50405 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Gm8385-201ENSMUST00000058999 643 ntBASIC11.52□□□□□ -0.57
SftpbP50405 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
SftpbP50405 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
SftpbP50405 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
SftpbP50405 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.52□□□□□ -0.57
SftpbP50405 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
SftpbP50405 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.52□□□□□ -0.57
SftpbP50405 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.52□□□□□ -0.57
SftpbP50405 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
SftpbP50405 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.52□□□□□ -0.57
SftpbP50405 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.52□□□□□ -0.57
SftpbP50405 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SftpbP50405 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.52□□□□□ -0.57
SftpbP50405 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
SftpbP50405 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
SftpbP50405 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SftpbP50405 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SftpbP50405 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SftpbP50405 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SftpbP50405 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
SftpbP50405 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SftpbP50405 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.51□□□□□ -0.57
SftpbP50405 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.51□□□□□ -0.57
SftpbP50405 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.51□□□□□ -0.57
SftpbP50405 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SftpbP50405 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SftpbP50405 Gm18734-201ENSMUST00000172937 808 ntBASIC11.51□□□□□ -0.57
SftpbP50405 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms