Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC9.98□□□□□ -0.81
GdnfP48540 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC9.98□□□□□ -0.81
GdnfP48540 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC9.98□□□□□ -0.81
GdnfP48540 Gm19540-201ENSMUST00000221843 810 ntBASIC9.98□□□□□ -0.81
GdnfP48540 AC154171.1-201ENSMUST00000224610 643 ntBASIC9.98□□□□□ -0.81
GdnfP48540 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC9.98□□□□□ -0.81
GdnfP48540 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.98□□□□□ -0.81
GdnfP48540 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
GdnfP48540 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
GdnfP48540 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
GdnfP48540 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
GdnfP48540 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
GdnfP48540 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
GdnfP48540 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
GdnfP48540 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
GdnfP48540 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.97□□□□□ -0.81
GdnfP48540 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
GdnfP48540 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
GdnfP48540 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
GdnfP48540 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
GdnfP48540 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
GdnfP48540 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.97□□□□□ -0.81
GdnfP48540 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
GdnfP48540 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
GdnfP48540 Gm22709-201ENSMUST00000116893 111 ntBASIC9.97□□□□□ -0.81
GdnfP48540 Gm13665-201ENSMUST00000120830 528 ntBASIC9.97□□□□□ -0.81
GdnfP48540 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
GdnfP48540 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC9.97□□□□□ -0.81
GdnfP48540 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.97□□□□□ -0.81
GdnfP48540 Gm37017-201ENSMUST00000195266 747 ntBASIC9.97□□□□□ -0.81
GdnfP48540 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.97□□□□□ -0.81
GdnfP48540 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
GdnfP48540 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
GdnfP48540 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
GdnfP48540 Gm5455-201ENSMUST00000058710 715 ntBASIC9.97□□□□□ -0.81
GdnfP48540 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.97□□□□□ -0.81
GdnfP48540 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
GdnfP48540 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.97□□□□□ -0.81
GdnfP48540 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
GdnfP48540 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
GdnfP48540 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
GdnfP48540 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
GdnfP48540 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
GdnfP48540 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
GdnfP48540 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
GdnfP48540 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
GdnfP48540 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
GdnfP48540 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
GdnfP48540 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
GdnfP48540 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.81
GdnfP48540 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
GdnfP48540 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
GdnfP48540 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
GdnfP48540 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms