Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.54□□□□□ -0.72
Sox2P48432 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Sox2P48432 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sox2P48432 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.54□□□□□ -0.72
Sox2P48432 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Sox2P48432 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.54□□□□□ -0.72
Sox2P48432 Gm15207-201ENSMUST00000119259 442 ntBASIC10.54□□□□□ -0.72
Sox2P48432 Gm11783-201ENSMUST00000119549 885 ntBASIC10.54□□□□□ -0.72
Sox2P48432 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.54□□□□□ -0.72
Sox2P48432 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.54□□□□□ -0.72
Sox2P48432 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Sox2P48432 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 Gm8343-201ENSMUST00000182705 994 ntBASIC10.54□□□□□ -0.72
Sox2P48432 Gm28686-201ENSMUST00000187404 609 ntBASIC10.54□□□□□ -0.72
Sox2P48432 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.54□□□□□ -0.72
Sox2P48432 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 Gm9353-201ENSMUST00000200472 604 ntBASIC10.54□□□□□ -0.72
Sox2P48432 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sox2P48432 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.54□□□□□ -0.72
Sox2P48432 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.54□□□□□ -0.72
Sox2P48432 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.54□□□□□ -0.72
Sox2P48432 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.54□□□□□ -0.72
Sox2P48432 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sox2P48432 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sox2P48432 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.54□□□□□ -0.72
Sox2P48432 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.54□□□□□ -0.72
Sox2P48432 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sox2P48432 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.54□□□□□ -0.72
Sox2P48432 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Sox2P48432 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.54□□□□□ -0.72
Sox2P48432 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Sox2P48432 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sox2P48432 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.53□□□□□ -0.72
Sox2P48432 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sox2P48432 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.53□□□□□ -0.72
Sox2P48432 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Sox2P48432 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sox2P48432 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sox2P48432 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Gm14127-201ENSMUST00000117906 678 ntBASIC10.53□□□□□ -0.72
Sox2P48432 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.53□□□□□ -0.72
Sox2P48432 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.53□□□□□ -0.72
Sox2P48432 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.53□□□□□ -0.72
Sox2P48432 Gm26047-201ENSMUST00000157308 113 ntBASIC10.53□□□□□ -0.72
Sox2P48432 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.53□□□□□ -0.72
Sox2P48432 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.53□□□□□ -0.72
Sox2P48432 Gm43184-201ENSMUST00000197247 542 ntBASIC10.53□□□□□ -0.72
Sox2P48432 Gm26047-202ENSMUST00000198840 115 ntBASIC10.53□□□□□ -0.72
Sox2P48432 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Sox2P48432 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.53□□□□□ -0.72
Sox2P48432 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Sox2P48432 Gm21769-201ENSMUST00000211922 111 ntBASIC10.53□□□□□ -0.72
Sox2P48432 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.53□□□□□ -0.72
Sox2P48432 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.53□□□□□ -0.72
Sox2P48432 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sox2P48432 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sox2P48432 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sox2P48432 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.53□□□□□ -0.72
Sox2P48432 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sox2P48432 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms