Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.48□□□□□ -0.57
Vps4bP46467 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Vps4bP46467 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps4bP46467 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Vps4bP46467 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Vps4bP46467 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Vps4bP46467 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Vps4bP46467 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.47□□□□□ -0.57
Vps4bP46467 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.47□□□□□ -0.57
Vps4bP46467 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Vps4bP46467 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Vps4bP46467 Gm42867-201ENSMUST00000202995 469 ntBASIC11.47□□□□□ -0.57
Vps4bP46467 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.47□□□□□ -0.57
Vps4bP46467 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.47□□□□□ -0.57
Vps4bP46467 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.47□□□□□ -0.57
Vps4bP46467 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.47□□□□□ -0.57
Vps4bP46467 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Vps4bP46467 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.47□□□□□ -0.57
Vps4bP46467 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.47□□□□□ -0.57
Vps4bP46467 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Vps4bP46467 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps4bP46467 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.47□□□□□ -0.57
Vps4bP46467 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vps4bP46467 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Vps4bP46467 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.46□□□□□ -0.57
Vps4bP46467 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.46□□□□□ -0.57
Vps4bP46467 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vps4bP46467 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Vps4bP46467 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vps4bP46467 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vps4bP46467 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vps4bP46467 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vps4bP46467 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vps4bP46467 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vps4bP46467 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vps4bP46467 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vps4bP46467 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vps4bP46467 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vps4bP46467 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.46□□□□□ -0.57
Vps4bP46467 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.46□□□□□ -0.57
Vps4bP46467 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Vps4bP46467 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.46□□□□□ -0.57
Vps4bP46467 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.46□□□□□ -0.57
Vps4bP46467 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.46□□□□□ -0.57
Vps4bP46467 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Vps4bP46467 Gm9353-201ENSMUST00000200472 604 ntBASIC11.46□□□□□ -0.57
Vps4bP46467 Gm4482-201ENSMUST00000200876 742 ntBASIC11.46□□□□□ -0.57
Vps4bP46467 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.46□□□□□ -0.57
Vps4bP46467 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.46□□□□□ -0.57
Vps4bP46467 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.46□□□□□ -0.57
Vps4bP46467 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vps4bP46467 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.46□□□□□ -0.57
Vps4bP46467 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vps4bP46467 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Vps4bP46467 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Vps4bP46467 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vps4bP46467 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.46□□□□□ -0.58
Vps4bP46467 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vps4bP46467 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vps4bP46467 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vps4bP46467 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Vps4bP46467 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Vps4bP46467 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vps4bP46467 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vps4bP46467 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Vps4bP46467 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Vps4bP46467 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms