Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh2P43247 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh2P43247 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Msh2P43247 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.65□□□□□ -0.54
Msh2P43247 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh2P43247 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh2P43247 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Msh2P43247 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Msh2P43247 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Msh2P43247 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Msh2P43247 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Msh2P43247 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Msh2P43247 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.65□□□□□ -0.55
Msh2P43247 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Msh2P43247 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.64□□□□□ -0.55
Msh2P43247 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Msh2P43247 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Msh2P43247 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.64□□□□□ -0.55
Msh2P43247 Gm12501-201ENSMUST00000119163 529 ntBASIC11.64□□□□□ -0.55
Msh2P43247 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Msh2P43247 Gm4310-201ENSMUST00000177847 889 ntBASIC11.64□□□□□ -0.55
Msh2P43247 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.64□□□□□ -0.55
Msh2P43247 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.64□□□□□ -0.55
Msh2P43247 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Msh2P43247 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Msh2P43247 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.64□□□□□ -0.55
Msh2P43247 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Msh2P43247 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Msh2P43247 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.63□□□□□ -0.55
Msh2P43247 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Msh2P43247 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Msh2P43247 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Msh2P43247 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Msh2P43247 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
Msh2P43247 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Msh2P43247 Gm11663-201ENSMUST00000117888 290 ntBASIC11.63□□□□□ -0.55
Msh2P43247 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.63□□□□□ -0.55
Msh2P43247 Gm8566-201ENSMUST00000120174 465 ntBASIC11.63□□□□□ -0.55
Msh2P43247 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Gm18734-201ENSMUST00000172937 808 ntBASIC11.63□□□□□ -0.55
Msh2P43247 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
Msh2P43247 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.63□□□□□ -0.55
Msh2P43247 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.63□□□□□ -0.55
Msh2P43247 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Msh2P43247 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Msh2P43247 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.63□□□□□ -0.55
Msh2P43247 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.63□□□□□ -0.55
Msh2P43247 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.63□□□□□ -0.55
Msh2P43247 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Msh2P43247 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Msh2P43247 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Msh2P43247 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh2P43247 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Msh2P43247 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh2P43247 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Msh2P43247 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh2P43247 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Msh2P43247 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Msh2P43247 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Msh2P43247 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Msh2P43247 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Msh2P43247 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Msh2P43247 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh2P43247 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh2P43247 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh2P43247 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Msh2P43247 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms