Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd1P33215 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd1P33215 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.67□□□□□ -0.38
Nedd1P33215 Gm28324-201ENSMUST00000187913 264 ntBASIC12.67□□□□□ -0.38
Nedd1P33215 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.67□□□□□ -0.38
Nedd1P33215 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.67□□□□□ -0.38
Nedd1P33215 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nedd1P33215 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd1P33215 Gm25580-201ENSMUST00000083409 327 ntBASIC12.67□□□□□ -0.38
Nedd1P33215 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Nedd1P33215 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nedd1P33215 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.67□□□□□ -0.38
Nedd1P33215 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.67□□□□□ -0.38
Nedd1P33215 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.67□□□□□ -0.38
Nedd1P33215 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd1P33215 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd1P33215 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd1P33215 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd1P33215 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd1P33215 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd1P33215 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd1P33215 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.67□□□□□ -0.38
Nedd1P33215 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd1P33215 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd1P33215 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd1P33215 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.67□□□□□ -0.38
Nedd1P33215 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.67□□□□□ -0.38
Nedd1P33215 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd1P33215 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nedd1P33215 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nedd1P33215 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nedd1P33215 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.66□□□□□ -0.38
Nedd1P33215 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.66□□□□□ -0.38
Nedd1P33215 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.66□□□□□ -0.38
Nedd1P33215 Gm12986-201ENSMUST00000119037 967 ntBASIC12.66□□□□□ -0.38
Nedd1P33215 Gm8194-201ENSMUST00000159783 859 ntBASIC12.66□□□□□ -0.38
Nedd1P33215 Snord55-201ENSMUST00000174939 79 ntBASIC12.66□□□□□ -0.38
Nedd1P33215 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nedd1P33215 Gm8492-201ENSMUST00000182375 987 ntBASIC12.66□□□□□ -0.38
Nedd1P33215 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.66□□□□□ -0.38
Nedd1P33215 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.66□□□□□ -0.38
Nedd1P33215 Gm37720-201ENSMUST00000195497 1241 ntBASIC12.66□□□□□ -0.38
Nedd1P33215 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nedd1P33215 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.66□□□□□ -0.38
Nedd1P33215 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.66□□□□□ -0.38
Nedd1P33215 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.66□□□□□ -0.38
Nedd1P33215 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.66□□□□□ -0.38
Nedd1P33215 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.66□□□□□ -0.38
Nedd1P33215 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nedd1P33215 Rgr-203ENSMUST00000225070 4704 ntBASIC12.66□□□□□ -0.38
Nedd1P33215 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Nedd1P33215 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nedd1P33215 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.65□□□□□ -0.38
Nedd1P33215 Gm12663-201ENSMUST00000118481 958 ntBASIC12.65□□□□□ -0.38
Nedd1P33215 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.65□□□□□ -0.38
Nedd1P33215 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.65□□□□□ -0.38
Nedd1P33215 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.65□□□□□ -0.38
Nedd1P33215 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.65□□□□□ -0.38
Nedd1P33215 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.65□□□□□ -0.38
Nedd1P33215 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Nedd1P33215 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.65□□□□□ -0.38
Nedd1P33215 Gm9102-201ENSMUST00000219250 465 ntBASIC12.65□□□□□ -0.38
Nedd1P33215 Gm9111-201ENSMUST00000219394 709 ntBASIC12.65□□□□□ -0.38
Nedd1P33215 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.65□□□□□ -0.38
Nedd1P33215 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.65□□□□□ -0.38
Nedd1P33215 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nedd1P33215 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nedd1P33215 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nedd1P33215 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms