Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.75□□□□□ -0.69
Slc6a11P31650 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.75□□□□□ -0.69
Slc6a11P31650 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Slc6a11P31650 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Slc6a11P31650 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Slc6a11P31650 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Gm22133-201ENSMUST00000102082 109 ntBASIC10.75□□□□□ -0.69
Slc6a11P31650 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Slc6a11P31650 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Slc6a11P31650 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.75□□□□□ -0.69
Slc6a11P31650 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Rn7s6-201ENSMUST00000175005 291 ntBASIC10.75□□□□□ -0.69
Slc6a11P31650 Gm6407-201ENSMUST00000176468 549 ntBASIC10.75□□□□□ -0.69
Slc6a11P31650 Gm4310-201ENSMUST00000177847 889 ntBASIC10.75□□□□□ -0.69
Slc6a11P31650 Gm9358-201ENSMUST00000183067 927 ntBASIC10.75□□□□□ -0.69
Slc6a11P31650 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.75□□□□□ -0.69
Slc6a11P31650 Gm38117-201ENSMUST00000194653 939 ntBASIC10.75□□□□□ -0.69
Slc6a11P31650 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.75□□□□□ -0.69
Slc6a11P31650 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
Slc6a11P31650 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.75□□□□□ -0.69
Slc6a11P31650 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.75□□□□□ -0.69
Slc6a11P31650 Gm10752-201ENSMUST00000218348 729 ntBASIC10.75□□□□□ -0.69
Slc6a11P31650 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Slc6a11P31650 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Slc6a11P31650 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Slc6a11P31650 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a11P31650 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a11P31650 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.74□□□□□ -0.69
Slc6a11P31650 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a11P31650 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.74□□□□□ -0.69
Slc6a11P31650 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Slc6a11P31650 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.74□□□□□ -0.69
Slc6a11P31650 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC10.74□□□□□ -0.69
Slc6a11P31650 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC10.74□□□□□ -0.69
Slc6a11P31650 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.74□□□□□ -0.69
Slc6a11P31650 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.74□□□□□ -0.69
Slc6a11P31650 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC10.74□□□□□ -0.69
Slc6a11P31650 CT485607.1-201ENSMUST00000216100 85 ntBASIC10.74□□□□□ -0.69
Slc6a11P31650 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC10.74□□□□□ -0.69
Slc6a11P31650 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.74□□□□□ -0.69
Slc6a11P31650 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a11P31650 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a11P31650 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Slc6a11P31650 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.74□□□□□ -0.69
Slc6a11P31650 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a11P31650 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a11P31650 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a11P31650 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a11P31650 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a11P31650 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a11P31650 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a11P31650 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a11P31650 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms