Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.29□□□□□ -0.6
Nckap1P28660 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.29□□□□□ -0.6
Nckap1P28660 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nckap1P28660 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nckap1P28660 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nckap1P28660 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nckap1P28660 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nckap1P28660 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nckap1P28660 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nckap1P28660 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nckap1P28660 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nckap1P28660 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nckap1P28660 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nckap1P28660 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nckap1P28660 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nckap1P28660 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nckap1P28660 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nckap1P28660 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nckap1P28660 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nckap1P28660 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.28□□□□□ -0.6
Nckap1P28660 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.28□□□□□ -0.6
Nckap1P28660 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nckap1P28660 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.28□□□□□ -0.6
Nckap1P28660 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.28□□□□□ -0.6
Nckap1P28660 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nckap1P28660 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.28□□□□□ -0.6
Nckap1P28660 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Nckap1P28660 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nckap1P28660 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nckap1P28660 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.28□□□□□ -0.6
Nckap1P28660 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nckap1P28660 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.28□□□□□ -0.6
Nckap1P28660 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.28□□□□□ -0.6
Nckap1P28660 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Gm28833-201ENSMUST00000189671 559 ntBASIC11.28□□□□□ -0.6
Nckap1P28660 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.28□□□□□ -0.6
Nckap1P28660 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.28□□□□□ -0.6
Nckap1P28660 Gm6423-201ENSMUST00000204315 934 ntBASIC11.28□□□□□ -0.6
Nckap1P28660 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.28□□□□□ -0.6
Nckap1P28660 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.28□□□□□ -0.6
Nckap1P28660 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.28□□□□□ -0.6
Nckap1P28660 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Nckap1P28660 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.28□□□□□ -0.6
Nckap1P28660 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.28□□□□□ -0.6
Nckap1P28660 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nckap1P28660 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.28□□□□□ -0.6
Nckap1P28660 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Nckap1P28660 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.28□□□□□ -0.6
Nckap1P28660 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.28□□□□□ -0.6
Nckap1P28660 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Nckap1P28660 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nckap1P28660 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nckap1P28660 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nckap1P28660 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nckap1P28660 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nckap1P28660 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nckap1P28660 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Nckap1P28660 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Nckap1P28660 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nckap1P28660 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Nckap1P28660 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nckap1P28660 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.27□□□□□ -0.61
Nckap1P28660 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.27□□□□□ -0.61
Nckap1P28660 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nckap1P28660 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.27□□□□□ -0.61
Nckap1P28660 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Nckap1P28660 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nckap1P28660 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nckap1P28660 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nckap1P28660 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.27□□□□□ -0.61
Nckap1P28660 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nckap1P28660 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms