Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hmga1P17095 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Hmga1P17095 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmga1P17095 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.5□□□□□ -0.57
Hmga1P17095 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hmga1P17095 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hmga1P17095 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hmga1P17095 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.49□□□□□ -0.57
Hmga1P17095 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Hmga1P17095 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.49□□□□□ -0.57
Hmga1P17095 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Hmga1P17095 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Hmga1P17095 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Hmga1P17095 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.49□□□□□ -0.57
Hmga1P17095 Gm12463-201ENSMUST00000118271 849 ntBASIC11.49□□□□□ -0.57
Hmga1P17095 Gm14213-201ENSMUST00000119778 768 ntBASIC11.49□□□□□ -0.57
Hmga1P17095 Gm12783-201ENSMUST00000121425 397 ntBASIC11.49□□□□□ -0.57
Hmga1P17095 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.49□□□□□ -0.57
Hmga1P17095 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Gm5529-201ENSMUST00000165691 891 ntBASIC11.49□□□□□ -0.57
Hmga1P17095 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.49□□□□□ -0.57
Hmga1P17095 Gm26989-201ENSMUST00000182608 749 ntBASIC11.49□□□□□ -0.57
Hmga1P17095 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.49□□□□□ -0.57
Hmga1P17095 Gm6390-201ENSMUST00000215034 589 ntBASIC11.49□□□□□ -0.57
Hmga1P17095 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.49□□□□□ -0.57
Hmga1P17095 Gm9111-201ENSMUST00000219394 709 ntBASIC11.49□□□□□ -0.57
Hmga1P17095 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.49□□□□□ -0.57
Hmga1P17095 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.49□□□□□ -0.57
Hmga1P17095 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.49□□□□□ -0.57
Hmga1P17095 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Hmga1P17095 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hmga1P17095 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hmga1P17095 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hmga1P17095 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.48□□□□□ -0.57
Hmga1P17095 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.48□□□□□ -0.57
Hmga1P17095 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.48□□□□□ -0.57
Hmga1P17095 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.48□□□□□ -0.57
Hmga1P17095 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hmga1P17095 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.48□□□□□ -0.57
Hmga1P17095 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hmga1P17095 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Hmga1P17095 Gm42660-201ENSMUST00000197733 947 ntBASIC11.48□□□□□ -0.57
Hmga1P17095 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.48□□□□□ -0.57
Hmga1P17095 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.48□□□□□ -0.57
Hmga1P17095 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hmga1P17095 Gm7589-201ENSMUST00000085631 534 ntBASIC11.48□□□□□ -0.57
Hmga1P17095 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.48□□□□□ -0.57
Hmga1P17095 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hmga1P17095 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.48□□□□□ -0.57
Hmga1P17095 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.48□□□□□ -0.57
Hmga1P17095 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.48□□□□□ -0.57
Hmga1P17095 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hmga1P17095 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms