Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
P04940 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.15□□□□□ -0.94
P04940 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.15□□□□□ -0.94
P04940 Gm5468-202ENSMUST00000227851 682 ntBASIC9.15□□□□□ -0.94
P04940 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
P04940 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
P04940 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
P04940 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.94
P04940 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
P04940 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
P04940 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
P04940 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
P04940 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
P04940 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
P04940 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
P04940 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
P04940 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
P04940 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
P04940 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
P04940 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
P04940 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
P04940 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
P04940 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
P04940 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
P04940 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
P04940 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.14□□□□□ -0.95
P04940 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.14□□□□□ -0.95
P04940 Gm9387-201ENSMUST00000098624 1320 ntBASIC9.14□□□□□ -0.95
P04940 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
P04940 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Gm16166-201ENSMUST00000118291 787 ntBASIC9.14□□□□□ -0.95
P04940 Gm15432-201ENSMUST00000121106 195 ntBASIC9.14□□□□□ -0.95
P04940 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
P04940 Mir6546-201ENSMUST00000184460 62 ntBASIC9.14□□□□□ -0.95
P04940 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.14□□□□□ -0.95
P04940 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.14□□□□□ -0.95
P04940 Gm43378-201ENSMUST00000199336 582 ntBASIC9.14□□□□□ -0.95
P04940 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.14□□□□□ -0.95
P04940 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.14□□□□□ -0.95
P04940 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.14□□□□□ -0.95
P04940 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC9.14□□□□□ -0.95
P04940 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
P04940 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
P04940 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
P04940 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.14□□□□□ -0.95
P04940 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
P04940 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
P04940 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
P04940 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
P04940 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.13□□□□□ -0.95
P04940 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.13□□□□□ -0.95
P04940 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.13□□□□□ -0.95
P04940 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
P04940 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
P04940 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms