Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tcof1O08784 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tcof1O08784 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tcof1O08784 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.21□□□□□ -0.29
Tcof1O08784 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcof1O08784 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tcof1O08784 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Tcof1O08784 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcof1O08784 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcof1O08784 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Tcof1O08784 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Tcof1O08784 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Tcof1O08784 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.21□□□□□ -0.29
Tcof1O08784 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcof1O08784 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Tcof1O08784 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.21□□□□□ -0.29
Tcof1O08784 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.21□□□□□ -0.29
Tcof1O08784 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Tcof1O08784 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.21□□□□□ -0.29
Tcof1O08784 Gm5599-201ENSMUST00000209602 788 ntBASIC13.21□□□□□ -0.29
Tcof1O08784 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.21□□□□□ -0.29
Tcof1O08784 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.21□□□□□ -0.29
Tcof1O08784 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcof1O08784 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcof1O08784 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcof1O08784 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.21□□□□□ -0.29
Tcof1O08784 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Tcof1O08784 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcof1O08784 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcof1O08784 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcof1O08784 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tcof1O08784 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tcof1O08784 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tcof1O08784 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tcof1O08784 AC125374.1-201ENSMUST00000213573 1400 ntBASIC13.21□□□□□ -0.3
Tcof1O08784 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Tcof1O08784 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tcof1O08784 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tcof1O08784 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tcof1O08784 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.21□□□□□ -0.3
Tcof1O08784 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tcof1O08784 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Tcof1O08784 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Tcof1O08784 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.2□□□□□ -0.3
Tcof1O08784 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.2□□□□□ -0.3
Tcof1O08784 Gm25554-201ENSMUST00000158075 113 ntBASIC13.2□□□□□ -0.3
Tcof1O08784 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.2□□□□□ -0.3
Tcof1O08784 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Gm5100-201ENSMUST00000195631 589 ntBASIC13.2□□□□□ -0.3
Tcof1O08784 Gm43380-201ENSMUST00000200421 220 ntBASIC13.2□□□□□ -0.3
Tcof1O08784 Mt1-202ENSMUST00000211807 1085 ntBASIC13.2□□□□□ -0.3
Tcof1O08784 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.2□□□□□ -0.3
Tcof1O08784 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.2□□□□□ -0.3
Tcof1O08784 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tcof1O08784 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.2□□□□□ -0.3
Tcof1O08784 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tcof1O08784 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcof1O08784 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tcof1O08784 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcof1O08784 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcof1O08784 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcof1O08784 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Tcof1O08784 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.19□□□□□ -0.3
Tcof1O08784 Snord17-201ENSMUST00000104526 238 ntBASIC13.19□□□□□ -0.3
Tcof1O08784 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Tcof1O08784 Gm14892-201ENSMUST00000117636 267 ntBASIC13.19□□□□□ -0.3
Tcof1O08784 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tcof1O08784 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.19□□□□□ -0.3
Tcof1O08784 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.19□□□□□ -0.3
Tcof1O08784 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.19□□□□□ -0.3
Tcof1O08784 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tcof1O08784 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.19□□□□□ -0.3
Tcof1O08784 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Tcof1O08784 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Tcof1O08784 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.19□□□□□ -0.3
Tcof1O08784 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tcof1O08784 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.19□□□□□ -0.3
Tcof1O08784 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms