Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gm15207-201ENSMUST00000119259 442 ntBASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gm26047-201ENSMUST00000157308 113 ntBASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gm37319-201ENSMUST00000193500 636 ntBASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gm26047-202ENSMUST00000198840 115 ntBASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gm17827-201ENSMUST00000211825 742 ntBASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pcdh1F7BJK1 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Gm13296-201ENSMUST00000117854 997 ntBASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Gm25668-201ENSMUST00000157700 129 ntBASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Gm4857-201ENSMUST00000192718 785 ntBASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Gm43184-201ENSMUST00000197247 542 ntBASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Gm45224-201ENSMUST00000208203 414 ntBASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 AC132446.1-201ENSMUST00000222655 226 ntBASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Gm4978-201ENSMUST00000071565 801 ntBASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pcdh1F7BJK1 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdh1F7BJK1 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdh1F7BJK1 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdh1F7BJK1 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdh1F7BJK1 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdh1F7BJK1 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Pcdh1F7BJK1 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pcdh1F7BJK1 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms