Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atf6F6VAN0 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.61□□□□□ -0.55
Atf6F6VAN0 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.61□□□□□ -0.55
Atf6F6VAN0 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.61□□□□□ -0.55
Atf6F6VAN0 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Gm9555-201ENSMUST00000200908 583 ntBASIC11.61□□□□□ -0.55
Atf6F6VAN0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.61□□□□□ -0.55
Atf6F6VAN0 Gm2517-201ENSMUST00000215651 348 ntBASIC11.61□□□□□ -0.55
Atf6F6VAN0 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.61□□□□□ -0.55
Atf6F6VAN0 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.61□□□□□ -0.55
Atf6F6VAN0 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.61□□□□□ -0.55
Atf6F6VAN0 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.61□□□□□ -0.55
Atf6F6VAN0 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.61□□□□□ -0.55
Atf6F6VAN0 AC154849.3-201ENSMUST00000223733 1660 ntBASIC11.61□□□□□ -0.55
Atf6F6VAN0 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.61□□□□□ -0.55
Atf6F6VAN0 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.61□□□□□ -0.55
Atf6F6VAN0 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Atf6F6VAN0 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.6□□□□□ -0.55
Atf6F6VAN0 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Gm12165-201ENSMUST00000117047 342 ntBASIC11.6□□□□□ -0.55
Atf6F6VAN0 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.6□□□□□ -0.55
Atf6F6VAN0 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Gm19353-201ENSMUST00000184561 445 ntBASIC11.6□□□□□ -0.55
Atf6F6VAN0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf6F6VAN0 Gm8574-201ENSMUST00000203207 924 ntBASIC11.6□□□□□ -0.55
Atf6F6VAN0 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC11.6□□□□□ -0.55
Atf6F6VAN0 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.6□□□□□ -0.55
Atf6F6VAN0 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms