Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Gm27956-201ENSMUST00000175604 260 ntBASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Kif4-ps-202ENSMUST00000185083 652 ntBASIC12.77□□□□□ -0.37
Syngap1F6SEU4 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.77□□□□□ -0.37
Syngap1F6SEU4 CT025603.1-201ENSMUST00000224040 448 ntBASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syngap1F6SEU4 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Gm23595-201ENSMUST00000104306 130 ntBASIC12.76□□□□□ -0.37
Syngap1F6SEU4 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Gm6612-201ENSMUST00000170777 395 ntBASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Gm10807-201ENSMUST00000177134 795 ntBASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Gm9192-201ENSMUST00000183221 985 ntBASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Gm43866-201ENSMUST00000203894 839 ntBASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Gm2448-201ENSMUST00000207080 559 ntBASIC12.76□□□□□ -0.37
Syngap1F6SEU4 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Syngap1F6SEU4 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Gm23745-201ENSMUST00000104230 125 ntBASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Gm23132-201ENSMUST00000104254 132 ntBASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Mir7088-201ENSMUST00000184227 86 ntBASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Mir8093-201ENSMUST00000185043 137 ntBASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Gm6606-201ENSMUST00000193613 947 ntBASIC12.75□□□□□ -0.37
Syngap1F6SEU4 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Gm3635-201ENSMUST00000212314 354 ntBASIC12.75□□□□□ -0.37
Syngap1F6SEU4 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.75□□□□□ -0.37
Syngap1F6SEU4 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Syngap1F6SEU4 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms