Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm10254-201ENSMUST00000052888 867 ntBASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Hfm1D3Z4R1 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Gm29245-201ENSMUST00000187332 1416 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Gm7805-201ENSMUST00000154348 448 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Gm43097-201ENSMUST00000196867 151 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Gm43667-201ENSMUST00000198616 1095 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Gm44917-201ENSMUST00000208798 520 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Gm18256-201ENSMUST00000209087 907 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Gm18164-201ENSMUST00000213769 927 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Gm18166-201ENSMUST00000215557 927 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Gm7242-201ENSMUST00000221134 705 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 CT025679.1-201ENSMUST00000227106 449 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Gm5424-201ENSMUST00000053865 1240 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Gm10581-201ENSMUST00000097986 231 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 AC156031.2-201ENSMUST00000213107 3310 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Gm5766-201ENSMUST00000160520 1977 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 AC167022.1-201ENSMUST00000218647 1458 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hfm1D3Z4R1 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Gm13688-201ENSMUST00000121557 608 ntBASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Gm14699-201ENSMUST00000122340 228 ntBASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Gm6686-201ENSMUST00000178455 258 ntBASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Gm2474-201ENSMUST00000195162 559 ntBASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Gm45893-201ENSMUST00000211899 247 ntBASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Gm18042-201ENSMUST00000219887 790 ntBASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hfm1D3Z4R1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Gm20091-201ENSMUST00000179683 189 ntBASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Gm8525-201ENSMUST00000189674 861 ntBASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Gm5190-201ENSMUST00000192434 357 ntBASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 AC132384.2-201ENSMUST00000218018 526 ntBASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 CT009713.2-201ENSMUST00000225532 1149 ntBASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Gm8730-201ENSMUST00000076373 954 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms