Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Gm43106-201ENSMUST00000199485 637 ntBASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Gm18862-201ENSMUST00000204643 933 ntBASIC11.42□□□□□ -0.58
Col4a6B1AVK5 AC133496.1-201ENSMUST00000223891 743 ntBASIC11.42□□□□□ -0.58
Col4a6B1AVK5 AC154461.1-201ENSMUST00000224207 1005 ntBASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col4a6B1AVK5 Erich3-203ENSMUST00000189969 3460 ntBASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Gm11235-201ENSMUST00000117763 333 ntBASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Gm12345-201ENSMUST00000119288 898 ntBASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Gm11544-201ENSMUST00000120215 382 ntBASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Gm14639-201ENSMUST00000120850 866 ntBASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Gm22388-201ENSMUST00000158194 248 ntBASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Gm43997-201ENSMUST00000203986 1005 ntBASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Col4a6B1AVK5 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Klf10-203ENSMUST00000227920 2144 ntBASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Gm23132-201ENSMUST00000104254 132 ntBASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC11.4□□□□□ -0.58
Col4a6B1AVK5 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Gm13281-201ENSMUST00000120871 567 ntBASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Gm13688-201ENSMUST00000121557 608 ntBASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Gm17782-201ENSMUST00000174345 880 ntBASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.4□□□□□ -0.58
Col4a6B1AVK5 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col4a6B1AVK5 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.4□□□□□ -0.59
Col4a6B1AVK5 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Col4a6B1AVK5 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms