Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Scn3aA2ASI5 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn3aA2ASI5 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn3aA2ASI5 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Scn3aA2ASI5 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn3aA2ASI5 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn3aA2ASI5 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm43167-201ENSMUST00000202001 1606 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm11919-201ENSMUST00000117609 721 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm37723-201ENSMUST00000194480 565 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm2448-201ENSMUST00000207080 559 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm13047-201ENSMUST00000117116 815 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm11380-201ENSMUST00000118067 560 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm11957-201ENSMUST00000118304 779 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm15136-201ENSMUST00000120552 533 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm15031-201ENSMUST00000121341 210 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Scn3aA2ASI5 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Gm28032-201ENSMUST00000184104 96 ntBASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Gm29763-201ENSMUST00000205306 616 ntBASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Gm4903-201ENSMUST00000210462 405 ntBASIC12.48□□□□□ -0.41
Scn3aA2ASI5 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Pck2-205ENSMUST00000226352 2784 ntBASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn3aA2ASI5 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms