Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PdfS4R2K0 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
PdfS4R2K0 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Gm8155-201ENSMUST00000216363 1612 ntBASIC8.69□□□□□ -1.02
PdfS4R2K0 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Gm13736-201ENSMUST00000119272 253 ntBASIC8.69□□□□□ -1.02
PdfS4R2K0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Gm15276-201ENSMUST00000145953 498 ntBASIC8.69□□□□□ -1.02
PdfS4R2K0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Gm3096-201ENSMUST00000185770 364 ntBASIC8.69□□□□□ -1.02
PdfS4R2K0 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Gm7118-201ENSMUST00000200167 1003 ntBASIC8.69□□□□□ -1.02
PdfS4R2K0 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC8.69□□□□□ -1.02
PdfS4R2K0 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PdfS4R2K0 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
PdfS4R2K0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
PdfS4R2K0 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC8.68□□□□□ -1.02
PdfS4R2K0 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
PdfS4R2K0 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
PdfS4R2K0 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Gm43372-201ENSMUST00000202662 3016 ntBASIC8.68□□□□□ -1.02
PdfS4R2K0 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Spata33-207ENSMUST00000212760 4074 ntBASIC8.68□□□□□ -1.02
PdfS4R2K0 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
PdfS4R2K0 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC8.68□□□□□ -1.02
PdfS4R2K0 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
PdfS4R2K0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
PdfS4R2K0 Gm10417-201ENSMUST00000194341 3522 ntBASIC8.68□□□□□ -1.02
PdfS4R2K0 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Gm13665-201ENSMUST00000120830 528 ntBASIC8.68□□□□□ -1.02
PdfS4R2K0 Gm14999-201ENSMUST00000121039 624 ntBASIC8.68□□□□□ -1.02
PdfS4R2K0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
PdfS4R2K0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
PdfS4R2K0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC8.68□□□□□ -1.02
PdfS4R2K0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC8.68□□□□□ -1.02
PdfS4R2K0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC8.68□□□□□ -1.02
PdfS4R2K0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC8.68□□□□□ -1.02
PdfS4R2K0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC8.68□□□□□ -1.02
PdfS4R2K0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
PdfS4R2K0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms