Protein–RNA interactions for Protein: Q9Z140

Cpne6, Copine-6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne6Q9Z140 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Gm8420-201ENSMUST00000097103 598 ntBASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpne6Q9Z140 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Gm26134-201ENSMUST00000178484 110 ntBASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Gm5298-201ENSMUST00000201122 892 ntBASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpne6Q9Z140 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cpne6Q9Z140 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cpne6Q9Z140 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cpne6Q9Z140 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cpne6Q9Z140 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cpne6Q9Z140 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cpne6Q9Z140 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Cpne6Q9Z140 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cpne6Q9Z140 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms